RTF2

Across TCGA patient cohorts, RTF2 protein abundance is significantly associated with the RNA expression of many other genes, with 12,077 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RTF2-associated genes across cancer lineages are CSTF1, NELFCD, and MOCS3. Each is linked with RTF2 in more than 7 cancer types. Because this analysis shows association rather than direction, both RTF2-to-partner and partner-to-RTF2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTF2 versus CSTF1 in OV, with a Pearson correlation of 0.50.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTF2→partner) and Y-score (partner→RTF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	CSTF1 →	+0.545	+0.527	<.001	<.001	3	8
COAD	NELFCD →	+0.755	+0.371	<.001	<.001	3	8
COAD	MOCS3 →	+0.719	+0.376	<.001	<.001	3	8
COAD	LSM14B →	+0.606	+0.353	<.001	<.001	3	8
UCEC	SYS1 →	+0.458	+0.321	<.001	<.001	3	8
OV	PRELID3B →	+0.631	+0.574	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,077 associations by consensus.

RTF2 vs CSTF1 — OV

Explore this scatter interactively →