RTCB

Across TCGA patient cohorts, RTCB protein abundance is significantly associated with the RNA expression of many other genes, with 10,174 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RTCB-associated genes across cancer lineages are CSF3R, MGAT1, and HK3. Each is linked with RTCB in more than 5 cancer types. Because this analysis shows association rather than direction, both RTCB-to-partner and partner-to-RTCB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTCB versus CSF3R in LSCC, with a Pearson correlation of -0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTCB→partner) and Y-score (partner→RTCB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	CSF3R →	-0.947	-0.129	<.001	<.001	3	5
GBM	MGAT1 →	-0.310	-0.189	<.001	<.001	3	5
GBM	HK3 →	-0.967	-0.180	<.001	<.001	3	5
GBM	SLC11A1 →	-0.980	-0.190	<.001	<.001	3	5
HNSC	LCP2 →	-0.782	-0.133	<.001	<.001	3	5
GBM	IL32 →	-0.707	-0.151	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,174 associations by consensus.

RTCB vs CSF3R — LSCC

Explore this scatter interactively →