RSRC1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RSRC1 mutation is significantly associated with the RNA expression of many other genes, with 3,037 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RSRC1-associated genes across cancer lineages are RNA5SP158, RPS29P9, and MRPS21P2. Each is linked with RSRC1 in more than 2 cancer types. Because this analysis shows association rather than direction, both RSRC1-to-partner and partner-to-RSRC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP158 grouped by RSRC1-low versus RSRC1-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RSRC1→partner) and Y-score (partner→RSRC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRNA5SP158 →+0.201+3.021<.001.00933
COADRPS29P9 →+0.810+4.021<.001.00632
COADMRPS21P2 →+0.426+3.870<.001.00632
COADATP5MGP7 →+0.336+5.020<.001<.00132
LUADRPL7AP72 →+0.077+5.044.003.00932
LUADTMEM97P2 →+0.154+5.984<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,037 associations by consensus.

RNA5SP158 by RSRC1 expression — SKCM

Box plot of RNA5SP158 in RSRC1-low vs RSRC1-high samples in SKCM.

Explore this box plot interactively →

Exploration