RSBN1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RSBN1 protein abundance is significantly associated with the RNA expression of many other genes, with 12,945 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RSBN1-associated genes across cancer lineages are PRPF38B, PRPF38A, and ST7L. Each is linked with RSBN1 in more than 5 cancer types. Because this analysis shows association rather than direction, both RSBN1-to-partner and partner-to-RSBN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RSBN1 versus PRPF38B in LSCC, with a Pearson correlation of 0.56.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RSBN1→partner) and Y-score (partner→RSBN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPRPF38B →+0.551+0.399<.001<.00136
HNSCPRPF38A →+0.428+0.212.005.00236
BRCAST7L →+0.515+0.286<.001<.00136
BRCALRIG2 →+0.481+0.297<.001<.00136
COADACYP1 →+0.633+0.411<.001<.00135
BRCAEEFSEC →+0.547+0.235<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,945 associations by consensus.

RSBN1 vs PRPF38B — LSCC

Per-sample scatter of RSBN1 vs PRPF38B in LSCC (Pearson r = 0.56).

Explore this scatter interactively →

Exploration