RRNAD1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RRNAD1 mutation is significantly associated with the RNA expression of many other genes, with 2,134 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RRNAD1-associated genes across cancer lineages are MIR769, RNU6-1060P, and RPS29P31. Each is linked with RRNAD1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RRNAD1-to-partner and partner-to-RRNAD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR769 grouped by RRNAD1-low versus RRNAD1-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RRNAD1→partner) and Y-score (partner→RRNAD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADMIR769 →+0.261+3.428.005.00732
PRADRNU6-1060P →+0.568+7.939<.001.00832
BLCARPS29P31 →+0.324+4.840<.001.00232
UCECRNY1P8 →+0.262+2.868<.001.00932
SKCMSRSF1P1 →+0.839+4.208<.001.00332
BRCAMIR6515 →+0.717+8.055<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,134 associations by consensus.

MIR769 by RRNAD1 expression — COAD

Box plot of MIR769 in RRNAD1-low vs RRNAD1-high samples in COAD.

Explore this box plot interactively →

Exploration