RRN3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RRN3 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,315 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RRN3-associated proteins across cancer lineages are DCTPP1, PARN, and GSPT1. Each is linked with RRN3 in more than 6 cancer types. Because this analysis shows association rather than direction, both RRN3-to-partner and partner-to-RRN3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RRN3 versus DCTPP1 in LSCC, with a Pearson correlation of 0.46.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RRN3→partner) and Y-score (partner→RRN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDCTPP1 →+0.646+0.634<.001<.00137
OVPARN →+0.349+0.543<.001<.00136
BRCAGSPT1 →+0.364+0.687<.001<.00136
BRCAUBFD1 →+0.449+0.718<.001<.00136
LSCCUBR7 →+0.329+0.374<.001.00135
LUADMRTFB →+0.353+0.423<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,315 associations by consensus.

RRN3 vs DCTPP1 — LSCC

Per-sample scatter of RRN3 vs DCTPP1 in LSCC (Pearson r = 0.46).

Explore this scatter interactively →

Exploration