RPTOR

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RPTOR mutation is significantly associated with the RNA expression of many other genes, with 1,605 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RPTOR-associated genes across cancer lineages are RNF145, SLC16A14, and REEP4. Each is linked with RPTOR in more than 1 cancer types. Because this analysis shows association rather than direction, both RPTOR-to-partner and partner-to-RPTOR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNF145 grouped by RPTOR-low versus RPTOR-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RPTOR→partner) and Y-score (partner→RPTOR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINERNF145 →+0.644+3.459<.001.00132
LARGE_INTESTINESLC16A14 →+1.030+3.541<.001<.00132
LARGE_INTESTINEREEP4 →+0.631+2.364<.001<.00132
LARGE_INTESTINECMTM4 →+0.634+2.459.006.00632
LARGE_INTESTINEKCNJ11 →+0.608+3.321.004.00232
LARGE_INTESTINEANKRD39 →+0.461+1.936<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,605 associations by consensus.

RNF145 by RPTOR expression — LARGE_INTESTINE

Box plot of RNF145 in RPTOR-low vs RPTOR-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration