RPS6KA3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RPS6KA3 mutation is significantly associated with the RNA expression of many other genes, with 5,696 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RPS6KA3-associated genes across cancer lineages are OR9G4, DPH6, and MZT1P1. Each is linked with RPS6KA3 in more than 2 cancer types. Because this analysis shows association rather than direction, both RPS6KA3-to-partner and partner-to-RPS6KA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR9G4 grouped by RPS6KA3-low versus RPS6KA3-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RPS6KA3→partner) and Y-score (partner→RPS6KA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAOR9G4 →+0.032+5.040.003.00233
UCECDPH6 →+0.341+2.343<.001<.00133
SKCMMZT1P1 →+0.134+3.449<.001.00232
UCECTAF9 →+0.695+3.000<.001<.00132
BRCACCDC121P1 →+0.261+4.539<.001.00532
UCECGAS6-DT →-0.360-1.267.002.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,696 associations by consensus.

OR9G4 by RPS6KA3 expression — BLCA

Box plot of OR9G4 in RPS6KA3-low vs RPS6KA3-high samples in BLCA.

Explore this box plot interactively →

Exploration