RPS3AP43

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RPS3AP43 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,238 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible RPS3AP43-associated proteins across cancer lineages are SH3BP1_S596, SH3BP2_S416, and ZNF219_S114. Each is linked with RPS3AP43 in more than 2 cancer types. Because this analysis shows association rather than direction, both RPS3AP43-to-partner and partner-to-RPS3AP43 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RPS3AP43 versus SH3BP1_S596 in LSCC, with a Pearson correlation of -0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RPS3AP43→partner) and Y-score (partner→RPS3AP43) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSH3BP1_S596 →-0.569-0.451<.001<.00133
BRCASH3BP2_S416 →-0.418-0.384.007<.00133
UCECZNF219_S114 →+0.718+1.102<.001.00233
CCRCCTHEMIS2 →+0.321+0.235<.001.00833
CCRCCCDC42BPB →-0.183-0.286.002.00133
HNSCDNASE2 →+0.409+0.690.003.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,238 associations by consensus.

RPS3AP43 vs SH3BP1_S596 — LSCC

Per-sample scatter of RPS3AP43 vs SH3BP1_S596 in LSCC (Pearson r = -0.37).

Explore this scatter interactively →

Exploration