RPS3AP42

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RPS3AP42 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,506 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RPS3AP42-associated proteins across cancer lineages are HDGFL3, TJP1, and ANTXR1. Each is linked with RPS3AP42 in more than 2 cancer types. Because this analysis shows association rather than direction, both RPS3AP42-to-partner and partner-to-RPS3AP42 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RPS3AP42 versus HDGFL3 in GBM, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RPS3AP42→partner) and Y-score (partner→RPS3AP42) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMHDGFL3 →+0.328+0.975<.001<.00133
UCECTJP1 →+0.318+0.382<.001.00133
UCECANTXR1 →+0.417+0.584<.001.00333
GBMPHC1 →+0.503+0.882<.001<.00132
GBMARHGEF26_S222 →+0.787+0.959<.001<.00132
OVPRAM1_S484 →-0.788-0.261<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,506 associations by consensus.

RPS3AP42 vs HDGFL3 — GBM

Per-sample scatter of RPS3AP42 vs HDGFL3 in GBM (Pearson r = 0.36).

Explore this scatter interactively →

Exploration