RPS29P4

Across TCGA patient cohorts, RPS29P4 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,931 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RPS29P4-associated GO terms across cancer lineages are Regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay, Negative regulation of cell cycle checkpoint, and Negative regulation of ubiquitin-dependent protein catabolic process. Each is linked with RPS29P4 in more than 2 cancer types. Because this analysis shows association rather than direction, both RPS29P4-to-partner and partner-to-RPS29P4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay grouped by RPS29P4-low versus RPS29P4-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RPS29P4→partner) and Y-score (partner→RPS29P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay →	+0.097	+0.061	<.001	<.001	3	3
HNSC	Negative regulation of cell cycle checkpoint →	+0.068	+0.014	<.001	.003	3	3
STAD	Negative regulation of ubiquitin-dependent protein catabolic process →	+0.103	+0.066	<.001	<.001	3	3
STAD	Central nervous system neuron differentiation →	+0.042	+0.073	<.001	<.001	3	3
STAD	Nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay →	+0.105	+0.067	<.001	<.001	3	3
STAD	Regulation of transporter activity →	+0.043	+0.056	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,931 associations by consensus.

Regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay by RPS29P4 expression — STAD

Explore this box plot interactively →