RPP30

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RPP30 mutation is significantly associated with the total protein of many other genes, with 12 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RPP30-associated genes across cancer lineages are MEK1, p27_pT157, and p62 Lck ligand. Each is linked with RPP30 in more than 1 cancer types. Because this analysis shows association rather than direction, both RPP30-to-partner and partner-to-RPP30 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MEK1 grouped by RPP30-low versus RPP30-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RPP30→partner) and Y-score (partner→RPP30) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.459+3.700.007.00131
UCECp27_pT157 →-0.084-3.156.001.01831
UCECp62 Lck ligand →+0.502+2.584<.001.01131
UCECRab11 →-0.181-3.302.007.01031
UCECS6_pS240_S244 →+0.421+2.584.026.01131
UCECASNS →+0.480+2.999.004.03531
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

MEK1 by RPP30 expression — UCEC

Box plot of MEK1 in RPP30-low vs RPP30-high samples in UCEC.

Explore this box plot interactively →

Exploration