Across TCGA patient cohorts, RPL39 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,950 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RPL39-associated proteins across cancer lineages are NKRF, NHP2, and DDX41. Each is linked with RPL39 in more than 7 cancer types. Because this analysis shows association rather than direction, both RPL39-to-partner and partner-to-RPL39 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RPL39→partner) and Y-score (partner→RPL39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	NKRF →	+0.594	+0.644	<.001	<.001	3	8
OV	NHP2 →	+0.378	+0.601	<.001	.003	3	6
GBM	DDX41 →	+0.215	+0.462	<.001	<.001	3	6
LSCC	THOC2 →	+0.292	+0.556	<.001	<.001	3	6
OV	NOC2L →	+0.466	+0.951	<.001	<.001	3	6
LSCC	URB1 →	+0.312	+0.479	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,950 associations by consensus.

Exploration

RPL39 survival (RNA) · tumor vs normal (RNA) · all RPL39 data types