Across TCGA patient cohorts, RPL39 protein abundance is significantly associated with the RNA expression of many other genes, with 4,398 significant associations in total. COAD shows the largest number of these associations.

The most reproducible RPL39-associated genes across cancer lineages are BCL2A1, FCGR3B, and CXCR2. Each is linked with RPL39 in more than 4 cancer types. Because this analysis shows association rather than direction, both RPL39-to-partner and partner-to-RPL39 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RPL39→partner) and Y-score (partner→RPL39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	BCL2A1 →	-1.131	-0.428	<.001	<.001	3	5
HNSC	FCGR3B →	-1.691	-1.232	<.001	<.001	3	5
LSCC	CXCR2 →	-0.891	-0.395	<.001	<.001	3	5
COAD	AQP9 →	-1.207	-0.501	<.001	<.001	3	4
COAD	CSF3R →	-1.086	-0.533	<.001	<.001	3	4
HNSC	IL1B →	-2.054	-0.960	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,398 associations by consensus.

Exploration

RPL39 survival (RNA) · tumor vs normal (RNA) · all RPL39 data types