RPL29

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RPL29 protein abundance is significantly associated with the RNA expression of many other genes, with 14,049 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RPL29-associated genes across cancer lineages are NHLRC3, PLEKHA8, and GNAZ. Each is linked with RPL29 in more than 3 cancer types. Because this analysis shows association rather than direction, both RPL29-to-partner and partner-to-RPL29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RPL29 versus NHLRC3 in HNSC, with a Pearson correlation of -0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RPL29→partner) and Y-score (partner→RPL29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCNHLRC3 →-0.539-0.275<.001<.00134
HNSCPLEKHA8 →-0.430-0.278.005.00134
LSCCGNAZ →-1.171-0.400<.001<.00134
COADCUL4B →-0.356-0.287.002.00134
LUADAVL9 →-0.381-0.243.004.00134
HNSCRFFL →-0.568-0.349<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,049 associations by consensus.

RPL29 vs NHLRC3 — HNSC

Per-sample scatter of RPL29 vs NHLRC3 in HNSC (Pearson r = -0.42).

Explore this scatter interactively →

Exploration