RPL13A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RPL13A mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible RPL13A-associated genes across cancer lineages are PPP1R2C, CST8, and SYCN. Each is linked with RPL13A in more than 1 cancer types. Because this analysis shows association rather than direction, both RPL13A-to-partner and partner-to-RPL13A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PPP1R2C grouped by RPL13A-low versus RPL13A-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RPL13A→partner) and Y-score (partner→RPL13A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaPPP1R2C →+0.230+4.539<.001.00731
BLOOD_LeukemiaCST8 →+0.046+4.969<.001.00331
BLOOD_LeukemiaSYCN →+0.037+4.539<.001.00731
BLOOD_LeukemiaTMEM95 →+0.020+5.269<.001<.00131
BLOOD_LeukemiaSLC36A2 →+0.015+4.551<.001.00431
LARGE_INTESTINEC6orf118 →+0.186+3.793<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

PPP1R2C by RPL13A expression — BLOOD_Leukemia

Box plot of PPP1R2C in RPL13A-low vs RPL13A-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration