RPF2

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, RPF2 mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated RPF2 data layer compared with 22 for mass-spec protein and 1 for mutation status.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where higher RPF2 mass-spec protein is associated with worse disease-free survival. In most high-consensus cancer types, elevated RPF2 expression acts as an unfavorable survival marker, although some lineages such as LSCC and UCEC show a favorable association.

CCRCC, LSCC, and PDAC are the cancer types where RPF2 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CCRCCDFSTertileIII,IV0.2950.692.00318view →
LSCCDFSTertileAll1.0000.461.00415view →
PDACDFSTertileII,III,IV0.2810.591.00110view →
UCECDFSQuartileIII,IV1.0000.229.0138view →
HNSCDFSMedianAll0.7050.865.0156view →
GBMOSMedianAll0.6240.408.0461view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

Exploration