RP2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RP2 mutation is significantly associated with the total protein of many other genes, with 46 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RP2-associated genes across cancer lineages are 14-3-3_beta, EGFR_pY1068, and eIF4G. Each is linked with RP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both RP2-to-partner and partner-to-RP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 14-3-3_beta grouped by RP2-low versus RP2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RP2→partner) and Y-score (partner→RP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC14-3-3_beta →-0.076-1.780.018.02431
UCECEGFR_pY1068 →-0.245-2.058.002<.00131
UCECeIF4G →+0.232+1.523.019.00831
UCECERK2 →+0.154+1.584.012.01731
UCECFoxM1 →+0.232+2.058.004<.00131
UCECG6PD →-0.211-1.571.041.03231
Each partner links to its Q-omics profile. Showing the 6 strongest of 46 associations by consensus.

14-3-3_beta by RP2 expression — UCEC

Box plot of 14-3-3_beta in RP2-low vs RP2-high samples in UCEC.

Explore this box plot interactively →

Exploration