ROGDI

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ROGDI mutation is significantly associated with the total protein of many other genes, with 17 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ROGDI-associated genes across cancer lineages are p38-MAPK_pT180_Y182, EGFR_pY1068, and eIF4G. Each is linked with ROGDI in more than 1 cancer types. Because this analysis shows association rather than direction, both ROGDI-to-partner and partner-to-ROGDI results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p38-MAPK_pT180_Y182 grouped by ROGDI-low versus ROGDI-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ROGDI→partner) and Y-score (partner→ROGDI) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp38-MAPK_pT180_Y182 →-0.450-1.794.015.02732
UCECEGFR_pY1068 →-0.231-2.321.025.00631
UCECeIF4G →+0.368+3.321.004.00931
UCECAcetyl-a-Tubulin-Lys40 →+0.457+2.321.029.00631
UCECp62 Lck ligand →+0.412+2.584.002.01031
UCECRab11 →-0.128-2.321.032.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

p38-MAPK_pT180_Y182 by ROGDI expression — UCEC

Box plot of p38-MAPK_pT180_Y182 in ROGDI-low vs ROGDI-high samples in UCEC.

Explore this box plot interactively →

Exploration