RNU6ATAC28P

Across TCGA patient cohorts, RNU6ATAC28P RNA expression is significantly associated with the RNA expression of many other genes, with 6,380 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNU6ATAC28P-associated genes across cancer lineages are RNU6-1104P, LINC02013, and LINC02294. Each is linked with RNU6ATAC28P in more than 10 cancer types. Because this analysis shows association rather than direction, both RNU6ATAC28P-to-partner and partner-to-RNU6ATAC28P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNU6ATAC28P versus RNU6-1104P in ESCA, with a Pearson correlation of 0.48.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6ATAC28P→partner) and Y-score (partner→RNU6ATAC28P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	RNU6-1104P →	+0.723	+0.080	<.001	.001	3	11
UCEC	LINC02013 →	+0.693	+0.067	<.001	.002	3	11
UCEC	LINC02294 →	+2.295	+0.087	<.001	<.001	3	10
UCEC	LINC02039 →	+0.751	+0.122	<.001	<.001	3	9
UCEC	RN7SKP174 →	+1.340	+0.160	<.001	<.001	3	9
KIRC	LINC02165 →	+0.721	+0.075	<.001	.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,380 associations by consensus.

RNU6ATAC28P vs RNU6-1104P — ESCA

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