RNU6-909P

Across TCGA patient cohorts, RNU6-909P RNA expression is significantly associated with the go_rna of many other GO terms, with 5,699 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU6-909P-associated GO terms across cancer lineages are DNA conformation change, Regulation of double-strand break repair via homologous recombination, and Kinetochore assembly. Each is linked with RNU6-909P in more than 9 cancer types. Because this analysis shows association rather than direction, both RNU6-909P-to-partner and partner-to-RNU6-909P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA conformation change grouped by RNU6-909P-low versus RNU6-909P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-909P→partner) and Y-score (partner→RNU6-909P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	DNA conformation change →	+0.108	+0.211	<.001	<.001	3	10
STAD	Regulation of double-strand break repair via homologous recombination →	+0.098	+0.371	<.001	<.001	3	9
STAD	Kinetochore assembly →	+0.106	+0.310	<.001	<.001	3	9
STAD	DNA-templated DNA replication →	+0.116	+0.201	<.001	<.001	3	9
UCEC	Protein localization to chromosome, centromeric region →	+0.126	+0.142	<.001	.002	3	9
STAD	DNA replication →	+0.114	+0.214	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,699 associations by consensus.

DNA conformation change by RNU6-909P expression — STAD

Explore this box plot interactively →