RNU6-729P

associated omics data
RNA, U6 small nuclear 729, pseudogeneGenealiases: []

Q-omics provides the consensus-scored RNU6-729P profile across patient tissues and cancer cell-line models. RNU6-729P expression is associated with patient survival in 13 of 34 cancer types, with the highest sampling consensus in LUSC. Among the 18 cancer types available for tumor–normal comparison, RNU6-729P is differentially expressed in 3, with the highest sampling consensus in BRCA. Additionally, RNU6-729P RNA expression shows 11,378 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight LUSC, BRCA, and UVM as cancer lineages where RNU6-729P shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RNU6-729P survival associations across molecular data types. RNU6-729P RNA expression shows survival associations in the most cancer types (13). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RNU6-729P data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier13LUSC (84)view →
This table ranks reproducible RNU6-729P RNA expression–survival associations across cancer types. High RNU6-729P expression shows unfavorable associations in LUSC, UCS, HNSC, UVM, CHOL and KICH. The LUSC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify LUSC as the clearest survival context for RNU6-729P RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LUSCDFSTertileII,III,IV0.3410.638<.00184view →
UCSDFSTertileAll0.1980.556.00254view →
HNSCOSTertileIII,IV0.2080.693<.00139view →
UVMOSTertileIII,IV0.0370.809<.00121view →
CHOLOSTertileIII,IV0.2750.886.04518view →
KICHDFSTertileAll0.1620.862.01415view →
Pink = unfavorable, green = favorable. all 13 lineages →

RNU6-729P-LUSC (DFS)

Kaplan–Meier survival curve for RNU6-729P RNA expression in LUSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RNU6-729P tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 3. The strongest signals are observed in BRCA for RNA.
RNU6-729P data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot3BRCA (6)view →
This table ranks reproducible tumor–normal expression differences for RNU6-729P. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RNU6-729P shows lower tumor expression in BRCA and KIRP and higher tumor expression in READ. The BRCA box plot shows higher RNU6-729P RNA expression in normal versus tumor tissue (log2 FC = −0.357, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BRCAFemaleII,III,IV−0.357<.0016view →
READAllIII,IV+0.685<.0012view →
KIRPMaleAll−0.176.0331view →
Green = repressed in tumor. all 3 lineages →

RNU6-729P-BRCA

Tumor-vs-normal expression box plot for RNU6-729P in BRCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with RNU6-729P in patient tissues and cancer cell lines. In patient samples, RNU6-729P shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA11,378UVM (3789)view →
Protein (mass-spec)10,859GBM (5629)view →