RNU6-709P

Across TCGA patient cohorts, RNU6-709P RNA expression is significantly associated with the go_rna of many other GO terms, with 5,441 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU6-709P-associated GO terms across cancer lineages are Negative regulation of mRNA processing, Double-strand break repair via nonhomologous end joining, and Translational initiation. Each is linked with RNU6-709P in more than 3 cancer types. Because this analysis shows association rather than direction, both RNU6-709P-to-partner and partner-to-RNU6-709P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of mRNA processing grouped by RNU6-709P-low versus RNU6-709P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-709P→partner) and Y-score (partner→RNU6-709P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Negative regulation of mRNA processing →	+0.099	+0.131	<.001	<.001	3	4
STAD	Double-strand break repair via nonhomologous end joining →	+0.095	+0.118	<.001	<.001	3	4
ESCA	Translational initiation →	+0.119	+0.158	<.001	.001	3	4
STAD	Regulation of macroautophagy →	+0.107	+0.127	<.001	<.001	3	4
STAD	Negative regulation of RNA splicing →	+0.113	+0.117	<.001	<.001	3	4
STAD	Tumor necrosis factor-mediated signaling pathway →	+0.089	+0.117	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,441 associations by consensus.

Negative regulation of mRNA processing by RNU6-709P expression — STAD

Explore this box plot interactively →