RNU6-678P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU6-678P RNA expression is significantly associated with the protein abundance of many other proteins, with 9,806 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RNU6-678P-associated proteins across cancer lineages are PPP1R18_S368, SND1_S645, and ZNF148. Each is linked with RNU6-678P in more than 3 cancer types. Because this analysis shows association rather than direction, both RNU6-678P-to-partner and partner-to-RNU6-678P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNU6-678P versus PPP1R18_S368 in GBM, with a Pearson correlation of -0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-678P→partner) and Y-score (partner→RNU6-678P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPPP1R18_S368 →-0.486-0.726.002.00434
GBMSND1_S645 →-0.751-0.595.007.00634
HNSCZNF148 →+0.349+1.081<.001<.00133
HNSCZNF513_S85 →+0.663+0.958<.001.00433
HNSCZNF638 →+0.307+0.980<.001<.00133
HNSCZNF687_S140 →+0.528+0.957<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,806 associations by consensus.

RNU6-678P vs PPP1R18_S368 — GBM

Per-sample scatter of RNU6-678P vs PPP1R18_S368 in GBM (Pearson r = -0.34).

Explore this scatter interactively →

Exploration