RNU6-554P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU6-554P RNA expression is significantly associated with the protein abundance of many other proteins, with 6,811 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RNU6-554P-associated proteins across cancer lineages are SF3B3, DHX9, and EPCAM. Each is linked with RNU6-554P in more than 2 cancer types. Because this analysis shows association rather than direction, both RNU6-554P-to-partner and partner-to-RNU6-554P results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-554P→partner) and Y-score (partner→RNU6-554P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSF3B3 →+0.193+0.757<.001<.00133
LSCCDHX9 →+0.269+0.937<.001<.00133
HNSCEPCAM →+0.840+0.559.004.00733
LSCCPOLR2E →+0.220+0.840<.001<.00133
LUADNDUFA9 →+0.254+0.267.004.00132
LSCCWDR5 →+0.254+0.605<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,811 associations by consensus.

Exploration