RNU6-520P

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNU6-520P RNA differs between tumor and matched normal tissue in 4 of 18 cancer types tested, making tumor–normal expression one of RNU6-520P’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where RNU6-520P RNA is more highly expressed in tumor relative to normal tissue. In most cancer types RNU6-520P is over-expressed in tumor, although a few such as THCA and LIHC show the opposite, repressed pattern.

KICH, THCA, and LIHC are the cancer types where RNU6-520P tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RNU6-520P RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHFemaleAll+0.296.0351view →
THCAAllAll−0.168.0131view →
LIHCFemaleAll−0.135.0221view →
LUSCMaleAll−0.134.0321view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 4 strongest of 4 lineages.

Exploration