RNU6-288P

associated omics data
RNA, U6 small nuclear 288, pseudogeneGenealiases: []

Q-omics provides the consensus-scored RNU6-288P profile across patient tissues and cancer cell-line models. RNU6-288P expression is associated with patient survival in 12 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, RNU6-288P is differentially expressed in 8, with the highest sampling consensus in LUSC. Additionally, RNU6-288P RNA expression shows 9,637 significant gene co-expression associations, with the highest sampling consensus in LAML. Together, these results highlight HNSC, LUSC, and LAML as cancer lineages where RNU6-288P shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RNU6-288P survival associations across molecular data types. RNU6-288P RNA expression shows survival associations in the most cancer types (12). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RNU6-288P data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier12HNSC (54)view →
This table ranks reproducible RNU6-288P RNA expression–survival associations across cancer types. High RNU6-288P expression shows unfavorable associations in KIRP and CESC, but favorable associations in HNSC, UCS, COAD and READ. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .001). Together, the overview and detailed table identify HNSC as the clearest survival context for RNU6-288P RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSTertileIV0.5060.287.00154view →
UCSOSTertileII,III,IV0.8910.518.03548view →
KIRPDFSTertileAll0.3770.697<.00146view →
CESCDFSTertileAll0.7340.845.00136view →
COADOSQuartileAll0.8580.564.01132view →
READOSTertileII,III,IV0.8870.340.02020view →
Pink = unfavorable, green = favorable. all 12 lineages →

RNU6-288P-HNSC (DFS)

Kaplan–Meier survival curve for RNU6-288P RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RNU6-288P tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in LUSC for RNA.
RNU6-288P data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8LUSC (5)view →
This table ranks reproducible tumor–normal expression differences for RNU6-288P. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RNU6-288P shows higher tumor expression in LUSC, HNSC, BLCA, STAD, LUAD and KICH. The LUSC box plot shows higher RNU6-288P RNA expression in tumor versus normal tissue (log2 FC = +0.450, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LUSCMaleAll+0.450<.0015view →
HNSCAllIII,IV+0.170.0373view →
BLCAAllAll+0.287.0342view →
STADAllIII,IV+0.440.0391view →
LUADAllAll+0.301.0371view →
KICHAllII,III,IV+0.196.0221view →
Green = repressed in tumor. all 8 lineages →

RNU6-288P-LUSC

Tumor-vs-normal expression box plot for RNU6-288P in LUSC.

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Cross-omics associations

This table shows molecular features associated with RNU6-288P in patient tissues and cancer cell lines. In patient samples, RNU6-288P shows the broadest associations at the RNA and protein expression levels, with LAML recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA9,637LAML (3535)view →
Protein (mass-spec)7,714LSCC (2794)view →