RNU6-162P

Across TCGA patient cohorts, RNU6-162P RNA expression is significantly associated with the mutation status of many other genes, with 297 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNU6-162P-associated genes across cancer lineages are ETS1, PCDHB15, and MAP7D3. Each is linked with RNU6-162P in more than 2 cancer types. Because this analysis shows association rather than direction, both RNU6-162P-to-partner and partner-to-RNU6-162P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ETS1 grouped by RNU6-162P-low versus RNU6-162P-high in STAD.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-162P→partner) and Y-score (partner→RNU6-162P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	ETS1 →	+5.274	+0.352	.006	.008	3	3
LUSC	PCDHB15 →	+4.517	+0.166	.004	<.001	3	2
STAD	MAP7D3 →	+3.537	+0.322	.004	<.001	3	2
STAD	MVP →	+3.274	+0.306	.006	<.001	3	2
STAD	OGT →	+3.859	+0.369	.003	<.001	3	2
LUAD	TUBA3E →	+5.912	+0.244	.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 297 associations by consensus.

ETS1 by RNU6-162P expression — STAD

Explore this box plot interactively →