RNU6-1230P

RNA expression — cross-omics
Cross-omicsRNA → MUTATIONPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU6-1230P RNA expression is significantly associated with the mutation status of many other genes, with 130 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU6-1230P-associated genes across cancer lineages are SEMG1, LAMC1, and SIN3B. Each is linked with RNU6-1230P in more than 1 cancer types. Because this analysis shows association rather than direction, both RNU6-1230P-to-partner and partner-to-RNU6-1230P results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-1230P→partner) and Y-score (partner→RNU6-1230P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASEMG1 →+7.473+0.136.007<.00132
STADLAMC1 →+4.824+0.130.003.00632
PRADSIN3B →+7.939+0.278.008.00931
PRADSYTL1 →+7.939+0.278.008.00931
PRADST6GAL2 →+7.939+1.663.008<.00131
PRADSFRP2 →+7.939+0.278.008.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 130 associations by consensus.

Exploration