RNU5F-3P

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, RNU5F-3P RNA is linked to patient survival in 12 of 34 cancer types, making it the most broadly survival-associated RNU5F-3P data layer.

The strongest signal is observed in kidney renal papillary cell carcinoma (KIRP), where higher RNU5F-3P RNA is associated with worse disease-free survival. In most high-consensus cancer types, elevated RNU5F-3P expression acts as an unfavorable survival marker, although some lineages such as BRCA and ESCA show a favorable association.

KIRP, HNSC, and BRCA are the cancer types where RNU5F-3P RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPDFSTertileII,III,IV0.1870.708.00175view →
HNSCOSTertileIII,IV0.1560.673.02436view →
BRCAOSTertileIII,IV0.9160.485.01936view →
THCADFSTertileII,III,IV0.1880.693.01636view →
LAMLDFSMedianAll0.2040.530.00426view →
KICHOSTertileIII,IV0.1780.847<.00124view →
ESCADFSTertileIII,IV0.6270.262.01118view →
SKCMDFSTertileAll0.4290.196.04015view →
LIHCDFSTertileII,III,IV0.7800.399.00712view →
LUSCDFSTertileAll0.5190.728.02712view →
MESODFSTertileAll0.3830.174.0426view →
LUADDFSTertileIII,IV0.8640.617.0483view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 12 lineages.

Exploration