RNU4ATAC6P

Across TCGA patient cohorts, RNU4ATAC6P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,026 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU4ATAC6P-associated GO terms across cancer lineages are Electron transport chain, Proton transmembrane transport, and Vitamin metabolic process. Each is linked with RNU4ATAC6P in more than 4 cancer types. Because this analysis shows association rather than direction, both RNU4ATAC6P-to-partner and partner-to-RNU4ATAC6P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Electron transport chain grouped by RNU4ATAC6P-low versus RNU4ATAC6P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU4ATAC6P→partner) and Y-score (partner→RNU4ATAC6P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Electron transport chain →	+0.134	+0.271	<.001	<.001	3	5
STAD	Proton transmembrane transport →	+0.108	+0.235	<.001	<.001	3	5
STAD	Vitamin metabolic process →	+0.080	+0.227	<.001	<.001	3	5
STAD	Nucleoside triphosphate metabolic process →	+0.128	+0.256	<.001	<.001	3	5
STAD	Ribosome assembly →	+0.139	+0.283	<.001	<.001	3	5
STAD	Telomere maintenance in response to DNA damage →	+0.104	+0.269	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,026 associations by consensus.

Electron transport chain by RNU4ATAC6P expression — STAD

Explore this box plot interactively →