RNU4ATAC3P

Across TCGA patient cohorts, RNU4ATAC3P RNA expression is significantly associated with the go_rna of many other GO terms, with 4,845 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU4ATAC3P-associated GO terms across cancer lineages are Regulation of circadian rhythm, Circadian rhythm, and Nucleobase-containing compound transport. Each is linked with RNU4ATAC3P in more than 3 cancer types. Because this analysis shows association rather than direction, both RNU4ATAC3P-to-partner and partner-to-RNU4ATAC3P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of circadian rhythm grouped by RNU4ATAC3P-low versus RNU4ATAC3P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU4ATAC3P→partner) and Y-score (partner→RNU4ATAC3P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of circadian rhythm →	+0.137	+0.067	<.001	<.001	3	4
STAD	Circadian rhythm →	+0.135	+0.062	<.001	<.001	3	4
STAD	Nucleobase-containing compound transport →	+0.171	+0.065	<.001	<.001	3	3
STAD	Obsolete histone modification →	+0.162	+0.064	<.001	<.001	3	3
STAD	Neuron migration →	+0.066	+0.070	<.001	<.001	3	3
STAD	Peptidyl-lysine modification →	+0.160	+0.070	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,845 associations by consensus.

Regulation of circadian rhythm by RNU4ATAC3P expression — STAD

Explore this box plot interactively →