RNU4-48P

associated omics data
RNA, U4 small nuclear 48, pseudogeneGenealiases: []

Q-omics provides the consensus-scored RNU4-48P profile across patient tissues and cancer cell-line models. RNU4-48P expression is associated with patient survival in 18 of 34 cancer types, with the highest sampling consensus in BLCA. Among the 18 cancer types available for tumor–normal comparison, RNU4-48P is differentially expressed in 7, with the highest sampling consensus in BRCA. Additionally, RNU4-48P RNA expression shows 11,018 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight BLCA, BRCA, and GBM as cancer lineages where RNU4-48P shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RNU4-48P survival associations across molecular data types. RNU4-48P RNA expression shows survival associations in the most cancer types (18). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RNU4-48P data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier18BLCA (87)view →
This table ranks reproducible RNU4-48P RNA expression–survival associations across cancer types. High RNU4-48P expression shows unfavorable associations in UCEC, MESO, CHOL, COAD and SARC, but favorable associations in BLCA. The BLCA Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .003). Together, the overview and detailed table identify BLCA as the clearest survival context for RNU4-48P RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BLCAOSTertileIV0.4810.218.00387view →
UCECDFSTertileAll0.4670.678<.00178view →
MESODFSTertileIII,IV0.2060.419.00166view →
CHOLOSTertileII,III,IV0.2530.796.01851view →
COADDFSTertileII,III,IV0.1600.506<.00130view →
SARCOSTertileAll0.2900.552.01027view →
Pink = unfavorable, green = favorable. all 18 lineages →

RNU4-48P-BLCA (OS)

Kaplan–Meier survival curve for RNU4-48P RNA expression in BLCA: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RNU4-48P tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 7. The strongest signals are observed in BRCA for RNA.
RNU4-48P data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot7BRCA (4)view →
This table ranks reproducible tumor–normal expression differences for RNU4-48P. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RNU4-48P shows lower tumor expression in KIRC, KIRP and KICH and higher tumor expression in BRCA, THCA and STAD. The BRCA box plot shows higher RNU4-48P RNA expression in tumor versus normal tissue (log2 FC = +0.203, t-test p = .005).
LineageGenderStageFold-changepSampling consensus
BRCAAllII,III,IV+0.203.0054view →
KIRCFemaleIV−0.373.0072view →
KIRPMaleAll−0.119.0442view →
THCAAllIV+0.412.0481view →
STADMaleII,III,IV+0.224.0431view →
KICHAllII,III,IV−0.104.0371view →
Green = repressed in tumor. all 7 lineages →

RNU4-48P-BRCA

Tumor-vs-normal expression box plot for RNU4-48P in BRCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with RNU4-48P in patient tissues and cancer cell lines. In patient samples, RNU4-48P shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)11,018GBM (2671)view →
RNA9,460LAML (2813)view →