RNU4-2

associated omics data
RNA, U4 small nuclear 2Genealiases: NEDHAFA · RENU · RNU4-1B · RNU4B1 · RNU4C · RP102

Q-omics provides the consensus-scored RNU4-2 profile across patient tissues and cancer cell-line models. RNU4-2 expression is associated with patient survival in 17 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, RNU4-2 is differentially expressed in 5, with the highest sampling consensus in THCA. Additionally, RNU4-2 RNA expression shows 13,976 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight KIRC, THCA, and THYM as cancer lineages where RNU4-2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RNU4-2 survival associations across molecular data types. RNU4-2 RNA expression shows survival associations in the most cancer types (17). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RNU4-2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier17KIRC (81)view →
This table ranks reproducible RNU4-2 RNA expression–survival associations across cancer types. High RNU4-2 expression shows unfavorable associations in KIRC and ACC, but favorable associations in STAD, CESC, COAD and LUAD. The KIRC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .002). Together, the overview and detailed table identify KIRC as the clearest survival context for RNU4-2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSMedianAll0.5600.707.00281view →
ACCOSQuartileIII,IV0.3150.836<.00163view →
STADDFSQuartileIII,IV0.6010.346.00259view →
CESCDFSQuartileAll0.6360.337.00132view →
COADOSQuartileAll0.9270.826.01430view →
LUADDFSTertileII,III,IV0.4960.201.00514view →
Pink = unfavorable, green = favorable. all 17 lineages →

RNU4-2-KIRC (OS)

Kaplan–Meier survival curve for RNU4-2 RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RNU4-2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 5. The strongest signals are observed in THCA for RNA.
RNU4-2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot5THCA (7)view →
This table ranks reproducible tumor–normal expression differences for RNU4-2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RNU4-2 shows lower tumor expression in THCA, KICH and BRCA and higher tumor expression in COAD and LIHC. The THCA box plot shows higher RNU4-2 RNA expression in normal versus tumor tissue (log2 FC = −2.670, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
THCAMaleIV−2.670<.0017view →
KICHAllII,III,IV−1.202<.0016view →
COADAllAll+1.395.0024view →
LIHCFemaleII,III,IV+2.381.0113view →
BRCAAllIII,IV−0.715.0452view →
Green = repressed in tumor. all 5 lineages →

RNU4-2-THCA

Tumor-vs-normal expression box plot for RNU4-2 in THCA.

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Cross-omics associations

This table shows molecular features associated with RNU4-2 in patient tissues and cancer cell lines. In patient samples, RNU4-2 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA13,976THYM (7312)view →
Protein (mass-spec)7,161CCRCC (1649)view →