RNU2-17P

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNU2-17P RNA differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of RNU2-17P’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where RNU2-17P RNA is repressed in tumor relative to normal tissue. In most cancer types RNU2-17P is over-expressed in tumor, although a few such as KICH and BRCA show the opposite, repressed pattern.

KICH, BRCA, and PRAD are the cancer types where RNU2-17P tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RNU2-17P RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHMaleAll−0.956<.0017view →
BRCAFemaleAll−0.168.0084view →
PRADAllAll−0.291<.0012view →
LIHCAllAll+0.180.0182view →
HNSCFemaleIII,IV−0.340.0331view →
CHOLMaleAll+0.335.0231view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

Exploration