RNPEPL1

Across TCGA patient cohorts, RNPEPL1 mutation is significantly associated with the RNA expression of many other genes, with 1,879 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNPEPL1-associated genes across cancer lineages are LINC02758, LINC02103, and CCL18. Each is linked with RNPEPL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNPEPL1-to-partner and partner-to-RNPEPL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC02758 grouped by RNPEPL1-low versus RNPEPL1-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNPEPL1→partner) and Y-score (partner→RNPEPL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CESC	LINC02758 →	+0.067	+3.684	.008	.005	3	2
CESC	LINC02103 →	+0.040	+4.837	.001	.003	3	2
UCEC	CCL18 →	+1.254	+2.008	.002	.005	3	2
COAD	MED31 →	+0.767	+3.335	<.001	.005	3	2
COAD	KLRC1 →	+0.371	+3.335	.004	.005	3	2
COAD	COPS3 →	+0.501	+3.389	.004	.004	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,879 associations by consensus.

LINC02758 by RNPEPL1 expression — CESC

Explore this box plot interactively →