RNPC3

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, RNPC3 mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated RNPC3 data layer compared with 24 for mass-spec protein and 3 for mutation status.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where higher RNPC3 mass-spec protein is associated with better disease-free survival. In most high-consensus cancer types, elevated RNPC3 expression acts as an unfavorable survival marker, although some lineages such as CCRCC and LSCC show a favorable association.

CCRCC, HNSC, and LSCC are the cancer types where RNPC3 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CCRCCDFSQuartileAll0.9480.505<.00121view →
HNSCDFSQuartileII,III,IV0.6900.920.01316view →
LSCCDFSMedianII,III,IV0.8390.576.0139view →
GBMDFSTertileAll0.8480.541.0295view →
PDACDFSMedianAll0.4800.215.0125view →
LUADDFSQuartileII,III,IV0.7810.180.0184view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

Exploration