RNGTT

Across TCGA patient cohorts, RNGTT RNA expression is significantly associated with the protein abundance of many other proteins, with 12,943 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RNGTT-associated proteins across cancer lineages are SYNCRIP, VTA1, and MDN1. Each is linked with RNGTT in more than 6 cancer types. Because this analysis shows association rather than direction, both RNGTT-to-partner and partner-to-RNGTT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNGTT versus SYNCRIP in LSCC, with a Pearson correlation of 0.70.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNGTT→partner) and Y-score (partner→RNGTT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SYNCRIP →	+0.302	+0.416	<.001	<.001	3	7
LSCC	VTA1 →	+0.302	+0.477	<.001	<.001	3	6
LSCC	MDN1 →	+0.319	+0.417	<.001	<.001	3	6
LSCC	PREP →	+0.406	+0.513	<.001	<.001	3	5
GBM	MAP3K4 →	+0.362	+0.419	<.001	<.001	3	5
HNSC	SCAF8 →	+0.195	+0.466	<.001	.002	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,943 associations by consensus.

RNGTT vs SYNCRIP — LSCC

Explore this scatter interactively →