RNF8

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF8 mutation is significantly associated with the total protein of many other genes, with 21 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF8-associated genes across cancer lineages are MEK1, Caspase-7-cleavedD198, and Di-Ras3. Each is linked with RNF8 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF8-to-partner and partner-to-RNF8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MEK1 grouped by RNF8-low versus RNF8-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF8→partner) and Y-score (partner→RNF8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.470+2.415.001.00332
UCECCaspase-7-cleavedD198 →+0.752+3.827.001<.00132
UCECDi-Ras3 →-0.159-3.156.007.01832
UCECEGFR_pY1068 →-0.201-2.459.046.01931
UCECeIF4E →+0.232+2.415.006.00331
UCECFibronectin →-0.280-1.990.034.03031
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

MEK1 by RNF8 expression — UCEC

Box plot of MEK1 in RNF8-low vs RNF8-high samples in UCEC.

Explore this box plot interactively →

Exploration