RNF44

Across TCGA patient cohorts, RNF44 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,971 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RNF44-associated proteins across cancer lineages are HCFC1, GTF3C2, and TCERG1. Each is linked with RNF44 in more than 4 cancer types. Because this analysis shows association rather than direction, both RNF44-to-partner and partner-to-RNF44 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNF44 versus HCFC1 in GBM, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF44→partner) and Y-score (partner→RNF44) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	HCFC1 →	+0.171	+0.305	<.001	<.001	3	5
GBM	GTF3C2 →	+0.254	+0.414	.002	.002	3	5
GBM	TCERG1 →	+0.254	+0.360	.003	.003	3	4
PDAC	UTP18_S205 →	+0.627	+0.392	.001	.002	3	4
LSCC	NPM1 →	+0.331	+0.637	<.001	<.001	3	4
GBM	NXF1 →	+0.326	+0.375	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,971 associations by consensus.

RNF44 vs HCFC1 — GBM

Explore this scatter interactively →