RNF187

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RNF187 protein abundance is significantly associated with the RNA expression of many other genes, with 3,584 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible RNF187-associated genes across cancer lineages are PGK1, HK2, and NTF4. Each is linked with RNF187 in more than 10 cancer types. Because this analysis shows association rather than direction, both RNF187-to-partner and partner-to-RNF187 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNF187 versus PGK1 in LUNG_NSCLC_LUAD, with a Pearson correlation of 0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF187→partner) and Y-score (partner→RNF187) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADPGK1 →+1.002+1.429<.001.001311
BREASTHK2 →+1.364+1.411.008.00336
OVARYNTF4 →-1.583-2.349<.001<.00135
LIVERLRRC58 →+0.641+2.077.007.00135
URINARY_TRACTHPRT1 →+1.229+4.310.001.00335
BONEPDLIM7 →-1.756-1.625.005.00435
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,584 associations by consensus.

RNF187 vs PGK1 — LUNG_NSCLC_LUAD

Per-sample scatter of RNF187 vs PGK1 in LUNG_NSCLC_LUAD (Pearson r = 0.47).

Explore this scatter interactively →

Exploration