RNF123

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF123 mutation is significantly associated with the RNA expression of many other genes, with 4,787 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF123-associated genes across cancer lineages are FUT10, RPL23AP82, and CDCA2. Each is linked with RNF123 in more than 3 cancer types. Because this analysis shows association rather than direction, both RNF123-to-partner and partner-to-RNF123 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FUT10 grouped by RNF123-low versus RNF123-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF123→partner) and Y-score (partner→RNF123) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFUT10 →+0.428+1.818<.001.00234
COADRPL23AP82 →+0.348+3.595.001.00133
COADCDCA2 →+0.801+2.428<.001.00233
COADPTMAP9 →+0.644+2.166.002.00933
SKCMSEC22C →+0.452+2.119.004.00333
SKCMMRPL39 →+0.424+3.594.003.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,787 associations by consensus.

FUT10 by RNF123 expression — UCEC

Box plot of FUT10 in RNF123-low vs RNF123-high samples in UCEC.

Explore this box plot interactively →

Exploration