RNF11

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF11 mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF11-associated genes across cancer lineages are EGFR_pY1068, GAPDH, and HER3_pY1289. Each is linked with RNF11 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF11-to-partner and partner-to-RNF11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by RNF11-low versus RNF11-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF11→partner) and Y-score (partner→RNF11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.248-2.415.014.00331
UCECGAPDH →+0.509+2.000.018.03031
UCECHER3_pY1289 →+0.069+1.933.045.00931
UCECJNK_pT183_Y185 →-0.181-2.459.007.01931
UCECJNK2 →+0.312+3.331<.001.00531
UCECKu80 →+0.344+2.428<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

EGFR_pY1068 by RNF11 expression — UCEC

Box plot of EGFR_pY1068 in RNF11-low vs RNF11-high samples in UCEC.

Explore this box plot interactively →

Exploration