RNASE3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNASE3 protein abundance is significantly associated with the RNA expression of many other genes, with 13,638 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RNASE3-associated genes across cancer lineages are MEFV, ADGRE3, and CEACAM3. Each is linked with RNASE3 in more than 7 cancer types. Because this analysis shows association rather than direction, both RNASE3-to-partner and partner-to-RNASE3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNASE3 versus MEFV in LSCC, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNASE3→partner) and Y-score (partner→RNASE3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMEFV →+0.798+0.711<.001<.00138
GBMADGRE3 →+0.817+1.055<.001<.00138
LSCCCEACAM3 →+0.707+0.735<.001<.00138
CCRCCFPR2 →+1.008+0.837<.001<.00138
PDACADGRG3 →+1.113+1.472<.001<.00138
HNSCLILRA5 →+0.792+0.651.002<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,638 associations by consensus.

RNASE3 vs MEFV — LSCC

Per-sample scatter of RNASE3 vs MEFV in LSCC (Pearson r = 0.45).

Explore this scatter interactively →

Exploration