RNA5SP500

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA5SP500 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,403 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RNA5SP500-associated proteins across cancer lineages are GIGYF1, MAP3K4_T447, and PLCL1_S47. Each is linked with RNA5SP500 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNA5SP500-to-partner and partner-to-RNA5SP500 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNA5SP500→partner) and Y-score (partner→RNA5SP500) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCGIGYF1 →-0.256-0.306<.001.00532
HNSCMAP3K4_T447 →+0.392+0.405.006.00932
UCECPLCL1_S47 →+0.756+0.683.004.00732
GBMARHGEF7 →+0.212+0.911.001<.00132
CCRCCANKRD13A →+0.296+0.274<.001.00232
CCRCCMAP3K1_S35 →+1.324+1.185.006.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,403 associations by consensus.

Exploration