RNA5SP489

Across TCGA patient cohorts, RNA5SP489 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,774 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNA5SP489-associated GO terms across cancer lineages are Pyrimidine-containing compound biosynthetic process, Vesicle-mediated transport in synapse, and Vesicle cytoskeletal trafficking. Each is linked with RNA5SP489 in more than 2 cancer types. Because this analysis shows association rather than direction, both RNA5SP489-to-partner and partner-to-RNA5SP489 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Pyrimidine-containing compound biosynthetic process grouped by RNA5SP489-low versus RNA5SP489-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNA5SP489→partner) and Y-score (partner→RNA5SP489) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Pyrimidine-containing compound biosynthetic process →	+0.170	+0.050	<.001	.001	3	3
ESCA	Vesicle-mediated transport in synapse →	+0.162	+0.052	<.001	.005	3	3
STAD	Vesicle cytoskeletal trafficking →	+0.172	+0.094	<.001	.001	3	3
ESCA	Negative regulation of protein localization →	+0.194	+0.101	<.001	.003	3	3
ESCA	Negative regulation of hydrolase activity →	+0.217	+0.053	<.001	.004	3	3
STAD	Lipid homeostasis →	+0.123	+0.070	<.001	.004	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,774 associations by consensus.

Pyrimidine-containing compound biosynthetic process by RNA5SP489 expression — STAD

Explore this box plot interactively →