RNA5SP412

Across TCGA patient cohorts, RNA5SP412 RNA expression is significantly associated with the mutation status of many other genes, with 5,703 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNA5SP412-associated genes across cancer lineages are PCIF1, ABCC4, and MYF6. Each is linked with RNA5SP412 in more than 3 cancer types. Because this analysis shows association rather than direction, both RNA5SP412-to-partner and partner-to-RNA5SP412 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCIF1 grouped by RNA5SP412-low versus RNA5SP412-high in LUSC.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNA5SP412→partner) and Y-score (partner→RNA5SP412) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUSC	PCIF1 →	+4.993	+0.754	.003	<.001	3	4
LUSC	ABCC4 →	+4.993	+0.299	.003	.006	3	4
UCEC	MYF6 →	+1.797	+0.414	.005	.001	3	4
UCEC	SLCO1B3 →	+1.765	+0.469	.001	<.001	3	4
UCEC	CPSF3 →	+2.159	+0.562	.001	<.001	3	4
UCEC	LARS1 →	+1.782	+0.544	.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,703 associations by consensus.

PCIF1 by RNA5SP412 expression — LUSC

Explore this box plot interactively →