RNA5SP230

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA5SP230 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,324 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNA5SP230-associated GO terms across cancer lineages are tRNA metabolic process, Obsolete negative regulation of mitochondrion organization, and RNA 3'-end processing. Each is linked with RNA5SP230 in more than 8 cancer types. Because this analysis shows association rather than direction, both RNA5SP230-to-partner and partner-to-RNA5SP230 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, tRNA metabolic process grouped by RNA5SP230-low versus RNA5SP230-high in LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNA5SP230→partner) and Y-score (partner→RNA5SP230) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCtRNA metabolic process →+0.119+0.025<.001.00339
LUSCObsolete negative regulation of mitochondrion organization →+0.119+0.030<.001<.00138
STADRNA 3'-end processing →+0.106+0.072<.001.00138
STADNegative regulation of protein catabolic process →+0.106+0.079<.001<.00138
LUSCDNA modification →+0.102+0.058<.001<.00138
STADVacuolar transport →+0.111+0.144<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,324 associations by consensus.

tRNA metabolic process by RNA5SP230 expression — LUSC

Box plot of tRNA metabolic process in RNA5SP230-low vs RNA5SP230-high samples in LUSC.

Explore this box plot interactively →

Exploration