RNA5SP143

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA5SP143 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,215 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNA5SP143-associated GO terms across cancer lineages are Pallium development, Vesicle-mediated transport in synapse, and Telencephalon development. Each is linked with RNA5SP143 in more than 7 cancer types. Because this analysis shows association rather than direction, both RNA5SP143-to-partner and partner-to-RNA5SP143 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Pallium development grouped by RNA5SP143-low versus RNA5SP143-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNA5SP143→partner) and Y-score (partner→RNA5SP143) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCAPallium development →+0.092+0.189<.001<.00138
ESCAVesicle-mediated transport in synapse →+0.084+0.422<.001<.00137
ESCATelencephalon development →+0.082+0.344<.001<.00137
ESCAMicrotubule polymerization or depolymerization →+0.117+0.300<.001<.00137
ESCARegulation of protein ubiquitination →+0.136+0.262<.001<.00137
ESCARegulation of microtubule-based process →+0.101+0.342<.001.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,215 associations by consensus.

Pallium development by RNA5SP143 expression — ESCA

Box plot of Pallium development in RNA5SP143-low vs RNA5SP143-high samples in ESCA.

Explore this box plot interactively →

Exploration