RN7SL640P

RNA expression — cross-omics
Cross-omicsRNA → MUTATIONPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SL640P RNA expression is significantly associated with the mutation status of many other genes, with 117 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RN7SL640P-associated genes across cancer lineages are UPB1, PPFIA1, and FBXO15. Each is linked with RN7SL640P in more than 1 cancer types. Because this analysis shows association rather than direction, both RN7SL640P-to-partner and partner-to-RN7SL640P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, UPB1 grouped by RN7SL640P-low versus RN7SL640P-high in STAD.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SL640P→partner) and Y-score (partner→RN7SL640P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADUPB1 →+4.275+0.045.007<.00132
STADPPFIA1 →+4.597+0.036.005.00132
STADFBXO15 →+6.597+0.113.001<.00132
BRCASRGAP1 →+5.436+0.049.001<.00131
BLCAIL7 →+7.640+0.164.009<.00131
BLCAEIF2B1 →+7.640+0.164.009<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 117 associations by consensus.

UPB1 by RN7SL640P expression — STAD

Box plot of UPB1 in RN7SL640P-low vs RN7SL640P-high samples in STAD.

Explore this box plot interactively →

Exploration